DNA Barcoding of Commercially Important Groupers (Epinephelidae) in Simeulue and Banyak Islands, Aceh, Indonesia

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Nur Fadli, Nanda Muhammad Razi, Adrian Damora, Zainal A. Muchlisin, Mutia Ramadhaniaty, Sri Riska Rahayu, Essy Harnelly, Ahasan Habib, Mohd Nor Siti-Azizah

2025 HAYATI Journal of Biosciences Vol. 32 Issue 4 Article Cited by 4 SDG 14SDG 17 Quartile

Abstract

The groupers are a group of demersal fish that live in tropical and subtropical areas and are mostly linked to coral reefs. The fish are highly valued in international markets and are subjected to overfishing in the wild. Accurate fish resource identification knowledge is essential for sustainable fisheries management. This research is aimed to generate a reference COI sequence library of grouper species caught in Simeulue and Banyak Islands, Aceh. The study was conducted from April-September 2021 at sixteen fish landing sites in Simeulue and Banyak Islands. In total, this study generated 70 COI sequences representing 20 grouper species. Epinephelus (54%) was the most prevalent grouper genus at the study site, followed by Cephalopholis (19%), Plectropomus (13%), Variola (12%), Hyporthodus (1%), and Anyperodon (1%). According to the IUCN classification, 17 species (85%) fall into the category of Least Concern, two (10%) fall into the category of Vulnerable, and one (5%) falls into the category of Data Deficient. The average genetic distance based on the Kimura-2-Parameter (K2P) between specimens was 0.51% at the species level and 8.34% at the genus level. Overall, this study has provided the COI sequence database of grouper for the Simeulue and Banyak Islands. © 2025@ author(s).

Affiliations

Faculty of Marine and Fisheries, Universitas Syiah Kuala, Banda Aceh, Indonesia; Research Center for Marine Sciences and Fisheries, Universitas Syiah Kuala, Banda Aceh, Indonesia; Graduate School of Mathematics and Applied Sciences, Universitas Syiah Kuala, Banda Aceh, Indonesia; Faculty of Mathematics and Natural Sciences, Universitas Syiah Kuala, Banda Aceh, Indonesia; Faculty of Fisheries and Food Science, Universiti Malaysia Terengganu, Terengganu, Malaysia; Institute of Climate Adaptation and Marine Biotechnology, Universiti Malaysia Terengganu, Terengganu, Malaysia

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